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Publication Year: 2024

31 to 40 of 582 Results

Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi Oct 16, 2024 - Facultad de Ciencias Bioquímicas y Farmacéuticas Alonso, Victoria Lucia; Escalante, Andrea Marta; Rodríguez Araya, Elvio; Frattini, Gianfranco; Tavernelli, Luis Emilio; Moreno, Diego M.; Furlan, Ricardo Luis Eugenio; Serra, Esteban Carlos, 2024, "Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi", https://doi.org/10.57715/UNR/NWDOCK, RDA UNR, V1, UNF:6:JMYmZQ1wsnut0WiVlNpu2Q== [fileUNF] Introduction Targeting lysine acetylation, particularly bromodomain-containing proteins (acetyl-lysine binders), shows promise as a novel antiparasitic target. Our research focuses on TcBDF3, a cytoplasmic bromodomain-containing protein crucial for Trypanosoma cruzi (the causativ...
A1B4c_DOCK.pdb Oct 16, 2024 - Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi application/vnd.palm - 272.1 KB - MD5: 109013827f31fb7bda749e5f76b3f9ba This file is the output file in pdb format of the best docking pose of a simulation performed with Glide in extra precision (XP) mode. The structure of the protein TcBDF3 was obtained from a representative snapshot of a molecular dynamics simulation. Ligand docking was performe...
A1B4_DOCK.pdb Oct 16, 2024 - Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi application/vnd.palm - 272.3 KB - MD5: 957a84fbf12becc1ff558c91beab51d8 This file is the output file in pdb format of the best docking pose of a simulation performed with Glide in extra precision (XP) mode. The structure of the protein TcBDF3 was obtained from a representative snapshot of a molecular dynamics simulation. Ligand docking was performe...
A5B4c_DOCK.pdb Oct 16, 2024 - Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi application/vnd.palm - 271.8 KB - MD5: 6c499502eb4b685de0a899e92b1d6480 This file is the output file in pdb format of the best docking pose of a simulation performed with Glide in extra precision (XP) mode. The structure of the protein TcBDF3 was obtained from a representative snapshot of a molecular dynamics simulation. Ligand docking was performe...
AUTHOR_DATASET_Readme_file.txt Oct 16, 2024 - Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi Plain Text - 8.8 KB - MD5: 8e61405be2072a46cc1a3ba68a65d069
BD_ET.jvp Oct 16, 2024 - Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi Unknown - 51.0 KB - MD5: 5eef07fa00fbb5076fe45b64e4d0f4dd List of sequences corresponding to the Bromodomain (BD) Extra-terminal domains (ET) used in the phylogenetic tree. Lista de secuencias correspondientes a los dominios extraterminales (ET) del Bromodominio (BD) utilizados en el árbol filogenético.
BD_ET.jvp.bak001 Oct 16, 2024 - Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi Unknown - 51.1 KB - MD5: 14858c5d6fcf75435bf9896f56e0133c File used for the Multiple Sequence Alignment of the extra-terminal domain (ET) of the Bromodomains (BD). Archivo utilizado para el Alineamiento de secuencias multiples del dominio extra-terminal (ET) de los Bromodominios (BD).
BD_ET_seqs.fasta Oct 16, 2024 - Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi Unknown - 98.4 KB - MD5: a90f382444cdc1ca2d7b55e62735312a Sequences of the Bromodomains (BD) extraterminal (ET) domains in fasta file used in the phylogenetic tree. Secuencias de los dominios extraterminales (ET) de los bromodominios (BD) en formato fasta utilizados en el árbol filogenético.
BD_msa.fasta Oct 16, 2024 - Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi Unknown - 58.9 KB - MD5: af1430e3969e901ff5b0b0805fa70861 Bromodomain (BD) sequences used for the multiple sequence alignment in fasta format. Secuencias de bromodominio (BD) utilizadas para la alineación de secuencias múltiples en formato fasta.
BD_seqs.fasta Oct 16, 2024 - Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi Unknown - 47.7 KB - MD5: 2f940f708f312303dd31ef46eeecd81b Sequences of the Bromodomains (BD) in fasta file used in the phylogenetic tree. Secuencias de los bromodominios (BD) en formato fasta utilizados en el árbol filogenético.

Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi

Oct 16, 2024 - Facultad de Ciencias Bioquímicas y Farmacéuticas

Alonso, Victoria Lucia; Escalante, Andrea Marta; Rodríguez Araya, Elvio; Frattini, Gianfranco; Tavernelli, Luis Emilio; Moreno, Diego M.; Furlan, Ricardo Luis Eugenio; Serra, Esteban Carlos, 2024, "Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi", https://doi.org/10.57715/UNR/NWDOCK, RDA UNR, V1, UNF:6:JMYmZQ1wsnut0WiVlNpu2Q== [fileUNF]

Introduction Targeting lysine acetylation, particularly bromodomain-containing proteins (acetyl-lysine binders), shows promise as a novel antiparasitic target. Our research focuses on TcBDF3, a cytoplasmic bromodomain-containing protein crucial for Trypanosoma cruzi (the causativ...

A1B4c_DOCK.pdb

Oct 16, 2024 - Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi

application/vnd.palm - 272.1 KB -

This file is the output file in pdb format of the best docking pose of a simulation performed with Glide in extra precision (XP) mode. The structure of the protein TcBDF3 was obtained from a representative snapshot of a molecular dynamics simulation. Ligand docking was performe...

A1B4_DOCK.pdb

Oct 16, 2024 - Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi

application/vnd.palm - 272.3 KB -

A5B4c_DOCK.pdb

Oct 16, 2024 - Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi

application/vnd.palm - 271.8 KB -

AUTHOR_DATASET_Readme_file.txt

Oct 16, 2024 - Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi

Plain Text - 8.8 KB -

BD_ET.jvp

Oct 16, 2024 - Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi

Unknown - 51.0 KB -

List of sequences corresponding to the Bromodomain (BD) Extra-terminal domains (ET) used in the phylogenetic tree. Lista de secuencias correspondientes a los dominios extraterminales (ET) del Bromodominio (BD) utilizados en el árbol filogenético.

BD_ET.jvp.bak001

Oct 16, 2024 - Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi

Unknown - 51.1 KB -

File used for the Multiple Sequence Alignment of the extra-terminal domain (ET) of the Bromodomains (BD). Archivo utilizado para el Alineamiento de secuencias multiples del dominio extra-terminal (ET) de los Bromodominios (BD).

BD_ET_seqs.fasta

Oct 16, 2024 - Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi

Unknown - 98.4 KB -

Sequences of the Bromodomains (BD) extraterminal (ET) domains in fasta file used in the phylogenetic tree. Secuencias de los dominios extraterminales (ET) de los bromodominios (BD) en formato fasta utilizados en el árbol filogenético.

BD_msa.fasta

Oct 16, 2024 - Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi

Unknown - 58.9 KB -

Bromodomain (BD) sequences used for the multiple sequence alignment in fasta format. Secuencias de bromodominio (BD) utilizadas para la alineación de secuencias múltiples en formato fasta.

BD_seqs.fasta

Oct 16, 2024 - Experimental data on the binding and activity of 1,3,4-Oxadiazoles to Bromodomain factor 3 (TcBDF3) of Trypanosoma cruzi

Unknown - 47.7 KB -

Sequences of the Bromodomains (BD) in fasta file used in the phylogenetic tree. Secuencias de los bromodominios (BD) en formato fasta utilizados en el árbol filogenético.

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